Late to this and may be one of the things others have said, but mine did this during freeze protection mode as well. I have three things included in freeze protection:
- Pool
- Spa
- Cleaner - which only goes to the pool, not the spa
What would happen for me is the cleaner would run nonstop on freeze protection regardless of if pool mode or spa mode was on.
In pool mode, no problem - suck water from pool, put it back in the pool via pool mode AND cleaner. When it switched to Spa mode, it would suck from Spa, return to Spa AND cleaner, which as we know, the cleaner is in the pool. So, I would essentially be draining my Spa because the cleaner never turned off in freeze protection and was delivering water back into the pool.
I'll spare you the story of me asking my pool guy to give me panel with any feature I'd ever want, but I ended up getting a basic one and couldn't do what I'm about to say. But if you're able, change the setting on freeze protection mode so that the cleaner ONLY comes on when the Pool is on.